New papers for WormBase release WS183
Generated: 2007-10-20
Kammenga JE et al…
A Caenorhabditis elegans Wild Type Defies the Temperature-Size Rule Owing to a Single Nucleotide Polymorphism in tra-3
2007. PLoS Genet 3:e34.
[WormBase] [PubMed]
Zhao G et al…
Evidence for active maintenance of inverted repeat structures identified by a comparative genomic approach
2007. PLoS ONE 2:e262.
[WormBase] [PubMed]
Toth ML et al…
Influence of autophagy genes on ion-channel-dependent neuronal degeneration in Caenorhabditis elegans
2007. J Cell Sci 120:1134-1141.
[WormBase] [PubMed]
Ono K et al…
Structural components of the nonstriated contractile apparatuses in the Caenorhabditis elegans gonadal myoepithelial sheath and their essential roles for ovulation
2007. Dev Dyn 236:1093-1105.
[WormBase] [PubMed]
Mitchell PH et al…
The concentration-dependent effects of ethanol on Caenorhabditis elegans behaviour
2007. Pharmacogenomics J .
[WormBase] [PubMed]
Reinke V.
Think globally, act locally
2007. Nat Genet 39:287-289.
[WormBase] [PubMed]
Kee Y et al…
Evolutionary conservation of cell migration genes: from nematode neurons to vertebrate neural crest
2007. Genes Dev 21:391-396.
[WormBase] [PubMed]
Christensen J et al…
RBP2 Belongs to a Family of Demethylases, Specific for Tri-and Dimethylated Lysine 4 on Histone 3
2007. Cell 128:1063-1076.
[WormBase] [PubMed]
Ratsch G et al…
Improving the Caenorhabditis elegans genome annotation using machine learning
2007. PLoS Comput Biol 3:e20.
[WormBase] [PubMed]
Zhao Y et al…
The notch regulator maml1 interacts with p53 and functions as a coactivator
2007. J Biol Chem 282:11969-11981.
[WormBase] [PubMed]
Ou G et al…
Sensory Ciliogenesis in Caenorhabditis elegans: Assignment of IFT components into Distinct Modules Based on Transport and Phenotypic Profiles
2007. Mol Biol Cell 18:1554-1569.
[WormBase] [PubMed]
Rayes D et al…
Activation of Single Nicotinic Receptor Channels from Caenorhabditis elegans Muscle
2007. Mol Pharmacol 71:1407-1415.
[WormBase] [PubMed]
Hasshoff M et al…
The role of Caenorhabditis elegans insulin-like signaling in the behavioral avoidance of pathogenic Bacillus thuringiensis
2007. FASEB J 21:1801-1812.
[WormBase] [PubMed]
Totong R et al…
PAR-6 is required for junction formation but not apicobasal polarization in C. elegans embryonic epithelial cells
2007. Development 134:1259-1268.
[WormBase] [PubMed]
Brendza KM et al…
Phosphoethanolamine N-methyltransferase (PMT-1) catalyzes the first reaction of a new pathway for phosphocholine biosynthesis in Caenorhabditis elegans
2007. Biochem J 404:439-448.
[WormBase] [PubMed]
Maadani A et al…
Enterococcus faecalis Mutations Affecting Virulence in the C. elegans Model Host
2007. Infect Immun 75:2634-2637.
[WormBase] [PubMed]
Burgess DR.
Cytokinesis: LET-ting the Asters Signal
2007. Curr Biol 17:R130-2.
[WormBase] [PubMed]
Hughes SE et al…
Genetic and Pharmacological Factors That Influence Reproductive Aging in Nematodes
2007. PLoS Genet 3:e25.
[WormBase] [PubMed]
Wang S et al…
Induction of Germline Cell Cycle Arrest and Apoptosis by Sodium Arsenite in Caenorhabditis elegans
2007. Chem Res Toxicol 20:181-186.
[WormBase] [PubMed]
Vasudevan S et al…
The Caenorhabditis elegans cell-cycle regulator ZYG-11 defines a conserved family of CUL-2 complex components
2007. EMBO Rep 8:279-286.
[WormBase] [PubMed]
Hilbi H et al…
Environmental predators as models for bacterial pathogenesis
2007. Environ Microbiol 9:563-575.
[WormBase] [PubMed]
Phillips BT et al…
Reciprocal asymmetry of SYS-1/{beta}-catenin and POP-1/TCF controls asymmetric divisions in Caenorhabditis elegans
2007. Proc Natl Acad Sci U S A 104:3231-3236.
[WormBase] [PubMed]
Joyce EF and McKim KS.
When specialized sites are important for synapsis and the distribution of crossovers
2007. BioEssays 29:217-226.
[WormBase] [PubMed]
Yang J et al…
Purification and cloning of a novel serine protease from the nematode-trapping fungus Dactylellina varietas and its potential roles in infection against nematodes
2007. Appl Microbiol Biotechnol 75:557-565.
[WormBase] [PubMed]
Ercan S et al…
X chromosome repression by localization of the C. elegans dosage compensation machinery to sites of transcription initiation
2007. Nat Genet 39:403-408.
[WormBase] [PubMed]
Szewczyk NJ et al…
Opposed growth factor signals control protein degradation in muscles of Caenorhabditis elegans
2007. EMBO J 26:935-943.
[WormBase] [PubMed]
Von Stetina SE et al…
UNC-4 represses CEH-12/HB9 to specify synaptic inputs to VA motor neurons in C. elegans
2007. Genes Dev 21:332-346.
[WormBase] [PubMed]
Liu Y et al…
G alpha(q)-coupled muscarinic acetylcholine receptors enhance nicotinic acetylcholine receptor signaling in Caenorhabditis elegans mating behavior
2007. J Neurosci 27:1411-1421.
[WormBase] [PubMed]
Cowan CR and Hyman AA.
Acto-myosin reorganization and PAR polarity in C. elegans
2007. Development 134:1035-1043.
[WormBase] [PubMed]
Golden TR et al…
Dramatic age-related changes in nuclear and genome copy number in the nematode Caenorhabditis elegans
2007. Aging Cell 6:179-188.
[WormBase] [PubMed]
Li M et al…
Phosphorylation and functions of inhibitor-2 family of proteins
2007. Biochemistry 46:2380-2389.
[WormBase] [PubMed]
Bounoutas A and Chalfie M.
Touch sensitivity in Caenorhabditis elegans
2007. Pflugers Arch 454:691-702.
[WormBase] [PubMed]
Zhao G et al…
Identification of muscle-specific regulatory modules in Caenorhabditis elegans
2007. Genome Res 17:348-357.
[WormBase] [PubMed]
Hutterer A et al…
Mitotic activation of the kinase Aurora-A requires its binding partner Bora
2006. Dev Cell 11:147-157.
[WormBase] [PubMed]
Kanai Y et al…
Kinesin transports RNA: isolation and characterization of an RNA-transporting granule
2004. Neuron 43:513-525.
[WormBase] [PubMed]
Howng SL et al…
A novel ninein-interaction protein, CGI-99, blocks ninein phosphorylation by GSK3beta and is highly expressed in brain tumors
2004. FEBS Lett 566:162-168.
[WormBase] [PubMed]
Huarte M et al…
PA subunit from influenza virus polymerase complex interacts with a cellular protein with homology to a family of transcriptional activators
2001. J Virol 75:8597-8604.
[WormBase] [PubMed]
Hanai S et al…
Loss of poly(ADP-ribose) glycohydrolase causes progressive neurodegeneration in Drosophila melanogaster
2004. Proc Natl Acad Sci U S A 101:82-86.
[WormBase] [PubMed]
Schuldiner M et al…
Exploration of the function and organization of the yeast early secretory pathway through an epistatic miniarray profile
2005. Cell 123:507-519.
[WormBase] [PubMed]
Kimura N et al…
Identification of a novel transcription factor, ELYS, expressed predominantly in mouse foetal haematopoietic tissues
2002. Genes Cells 7:435-446.
[WormBase] [PubMed]
Kao G et al…
ASNA-1 Positively Regulates Insulin Secretion in C. elegans and Mammalian Cells
2007. Cell 128:577-587.
[WormBase] [PubMed]
Ji Q et al…
Characterization of STIP, a multi-domain nuclear protein, highly conserved in metazoans, and essential for embryogenesis in Caenorhabditis elegans
2007. Exp Cell Res 313:1460-1472.
[WormBase] [PubMed]
Hirose T et al…
A spliceosomal intron binding protein, IBP160, links position-dependent assembly of intron-encoded box C/D snoRNP to pre-mRNA splicing
2006. Mol Cell 23:673-684.
[WormBase] [PubMed]
Stein P et al…
RNAi: mammalian oocytes do it without RNA-dependent RNA polymerase
2003. RNA 9:187-192.
[WormBase] [PubMed]
Sam M et al…
Aquarius, a novel gene isolated by gene trapping with an RNA-dependent RNA polymerase motif
1998. Dev Dyn 212:304-317.
[WormBase] [PubMed]
Denker JA et al…
New components of the spliced leader RNP required for nematode trans-splicing
2002. Nature 417:667-670.
[WormBase] [PubMed]
Denker JA et al…
Multiple requirements for nematode spliced leader RNP function in trans-splicing
1996. RNA 2:746-755.
[WormBase] [PubMed]
Maroney PA et al…
Direct analysis of nematode cis- and trans-spliceosomes: a functional role for U5 snRNA in spliced leader addition trans-splicing and the identification of novel Sm snRNPs
1996. RNA 2:735-745.
[WormBase] [PubMed]
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[WormBase]
Dawe AS et al…
Continuous wave and simulated GSM exposure at 1.8 W/kg and 1.8 GHz do not induce hsp16-1 heat-shock gene expression in Caenorhabditis elegans
2007. Bioelectromagnetics .
[WormBase] [PubMed]
Samara C et al…
Autophagy is required for necrotic cell death in Caenorhabditis elegans
2007. Cell Death Differ .
[WormBase] [PubMed]
Hihi A et al…
Evolutionary conservation of drug action on lipoprotein metabolism-related targets
2007. J Lipid Res .
[WormBase] [PubMed]
Fujisawa K et al…
The slit receptor EVA-1 coactivates a SAX-3/Robo mediated guidance signal in C. elegans
2007. Science 317:1934-1938.
[WormBase] [PubMed]
Burmeister C et al…
Oxidative stress in Caenorhabditis elegans: protective effects of the Omega class glutathione transferase (GSTO-1)
2007. FASEB J .
[WormBase] [PubMed]
Greer EL et al…
An AMPK-FOXO Pathway Mediates Longevity Induced by a Novel Method of Dietary Restriction in C. elegans
2007. Curr Biol .
[WormBase] [PubMed]
Shaw WM et al…
The C. elegans TGF-beta Dauer Pathway Regulates Longevity via Insulin Signaling
2007. Curr Biol .
[WormBase] [PubMed]
Sugimoto T et al…
Caenorhabditis elegans par2.1/mtssb-1 is essential for mitochondrial DNA replication and its defect causes comprehensive transcriptional alterations including a hypoxia response
2007. Exp Cell Res .
[WormBase] [PubMed]
Liu Q et al…
Presynaptic Ca2+/calmodulin-dependent protein kinase II modulates neurotransmitter release by activating BK channels at Caenorhabditis elegans neuromuscular junction
2007. J Neurosci 27:10404-10413.
[WormBase] [PubMed]
Raverdy S et al…
Molecular and biochemical characterization of nematode cofactor independent phosphoglycerate mutases
2007. Mol Biochem Parasitol .
[WormBase] [PubMed]
Byrne AB et al…
A global analysis of genetic interactions in Caenorhabditis elegans
2007. J Biol 6:8.
[WormBase] [PubMed]
Audhya A et al…
MVB-12, a Fourth Subunit of Metazoan ESCRT-I, Functions in Receptor Downregulation
2007. PLoS ONE 2:e956.
[WormBase] [PubMed]
Arum O and Johnson TE.
Reduced Expression of the Caenorhabditis elegans p53 Ortholog cep-1 Results in Increased Longevity
2007. J Gerontol A Biol Sci Med Sci 62:951-959.
[WormBase] [PubMed]
Wolf M et al…
The MAP kinase JNK-1 of Caenorhabditis elegans: Location, activation, and influences over temperature-dependent insulin-like signaling, stress responses, and fitness
2007. J Cell Physiol .
[WormBase] [PubMed]
Goulding MB et al…
Control of nuclear centration in the C. elegans zygote by receptor-independent G{alpha} signaling and myosin II
2007. J Cell Biol 178:1177-1191.
[WormBase] [PubMed]
Steiner FA et al…
Structural features of small RNA precursors determine Argonaute loading in Caenorhabditis elegans
2007. Nat Struct Mol Biol .
[WormBase] [PubMed]
van Buskirk C and Sternberg PW.
Epidermal growth factor signaling induces behavioral quiescence in Caenorhabditis elegans
2007. Nat Neurosci 10:1300-1307.
[WormBase] [PubMed]
Molin M et al…
Dihydroxyacetone-induced death is accompanied by advanced glycation endproduct formation in selected proteins of Saccharomyces cerevisiae and Caenorhabditis elegans
2007. Proteomics .
[WormBase] [PubMed]
Aladzsity I et al…
Autophagy Genes unc-51 and bec-1 Are Required for Normal Cell Size in Caenorhabditis elegans
2007. Genetics 177:655-660.
[WormBase] [PubMed]
Lin YC et al…
Human TRIM71 and Its Nematode Homologue are Targets of let-7 MicroRNA and Its Zebrafish Orthologue is Essential for Development
2007. Mol Biol Evol .
[WormBase] [PubMed]
Comber SD et al…
Bioaccumulation and toxicity of a cationic surfactant (DODMAC) in sediment dwelling freshwater invertebrates
2007. Environ Pollut .
[WormBase] [PubMed]
Luke CJ et al…
An intracellular serpin regulates necrosis by inhibiting the induction and sequelae of lysosomal injury
2007. Cell 130:1108-1119.
[WormBase] [PubMed]
Portman DS.
Genetic control of sex differences in C. elegans neurobiology and behavior
2007. Adv Genet 59:1-37.
[WormBase] [PubMed]
Kurz CL et al…
Caenorhabditis elegans pgp-5 is involved in resistance to bacterial infection and heavy metal and its regulation requires TIR-1 and a p38 map kinase cascade
2007. Biochem Biophys Res Commun .
[WormBase] [PubMed]
Issaeva I et al…
Knockdown of ALR (MLL2) reveals ALR target genes and leads to alterations in cell adhesion and growth
2007. Mol Cell Biol 27:1889-1903.
[WormBase] [PubMed]
Nakamura M et al…
Dicer-related drh-3 gene functions in germ-line development by maintenance of chromosomal integrity in Caenorhabditis elegans
2007. Genes Cells 12:997-1010.
[WormBase] [PubMed]
Hellerer T et al…
Monitoring of lipid storage in Caenorhabditis elegans using coherent anti-Stokes Raman scattering (CARS) microscopy
2007. Proc Natl Acad Sci U S A 104:14658-14663.
[WormBase] [PubMed]
Ciche TA and Sternberg PW.
Postembryonic RNAi in Heterorhabditis bacteriophora: a nematode insect parasite and host for insect pathogenic symbionts
2007. BMC Dev Biol 7:101.
[WormBase] [PubMed]
Gort EH et al…
The TWIST1 oncogene is a direct target of hypoxia-inducible factor-2alpha
2007. Oncogene .
[WormBase] [PubMed]
Casamassimi A and Napoli C.
Mediator complexes and eukaryotic transcription regulation: An overview
2007. Biochimie .
[WormBase] [PubMed]
Fung WY et al…
crm-1 facilitates BMP signaling to control body size in Caenorhabditis elegans
2007. Dev Biol .
[WormBase] [PubMed]
Stitzel ML et al…
Regulation of MBK-2/Dyrk Kinase by Dynamic Cortical Anchoring during the Oocyte-to-Zygote Transition
2007. Curr Biol .
[WormBase] [PubMed]
Maruyama R et al…
EGG-3 Regulates Cell-Surface and Cortex Rearrangements during Egg Activation in Caenorhabditis elegans
2007. Curr Biol .
[WormBase] [PubMed]
Akimkina T et al…
Isolation, characterization and complete nucleotide sequence of a novel temperate bacteriophage Min1, isolated from the nematode pathogen Microbacterium nematophilum
2007. Res Microbiol .
[WormBase] [PubMed]
Salinas LS et al…
The DEAD box RNA helicase VBH-1 is required for germ cell function in C. elegans
2007. Genesis 45:533-546.
[WormBase] [PubMed]
Shen X et al…
Ca(2+)/Calmodulin-binding proteins from the C. elegans proteome
2007. Cell Calcium .
[WormBase] [PubMed]
Eimer S et al…
Regulation of nicotinic receptor trafficking by the transmembrane Golgi protein UNC-50
2007. EMBO J .
[WormBase] [PubMed]
Gnanasekar M et al…
Identification and cloning of a novel tetraspanin (TSP) homologue from Brugia malayi
2007. DNA Seq 1.
[WormBase] [PubMed]
Kapitonov VV and Jurka J.
Helitrons on a roll: eukaryotic rolling-circle transposons
2007. Trends Genet .
[WormBase] [PubMed]
Brodie MS et al…
Ethanol interactions with calcium-dependent potassium channels
2007. Alcohol Clin Exp Res 31:1625-1632.
[WormBase] [PubMed]
Hunt-Newbury R et al…
High-throughput in vivo analysis of gene expression in Caenorhabditis elegans
2007. PLoS Biol 5:e237.
[WormBase] [PubMed]
Schonegg S et al…
The Rho GTPase-activating proteins RGA-3 and RGA-4 are required to set the initial size of PAR domains in Caenorhabditis elegans one-cell embryos
2007. Proc Natl Acad Sci U S A 104:14976-14981.
[WormBase] [PubMed]
Wu Z et al…
Caenorhabditis elegans neuronal regeneration is influenced by life stage, ephrin signaling, and synaptic branching
2007. Proc Natl Acad Sci U S A 104:15132-15137.
[WormBase] [PubMed]
Fox RM et al…
The embryonic muscle transcriptome of C. elegans
2007. Genome Biol 8:R188.
[WormBase] [PubMed]
Pickett CL et al…
A C. elegans Myc-like network cooperates with semaphorin and Wnt signaling pathways to control cell migration
2007. Dev Biol .
[WormBase] [PubMed]
Peters MA et al…
A Calcium Wave Mediated by Gap Junctions Coordinates a Rhythmic Behavior in C. elegans
2007. Curr Biol 17:1601-1608.
[WormBase] [PubMed]
Jospin M et al…
UNC-80 and the NCA Ion Channels Contribute to Endocytosis Defects in Synaptojanin Mutants
2007. Curr Biol 17:1595-1600.
[WormBase] [PubMed]
Sasagawa Y et al…
ER E3 ubiquitin ligase HRD-1 and its specific partner chaperone BiP play important roles in ERAD and developmental growth in Caenorhabditis elegans
2007. Genes Cells 12:1063-1073.
[WormBase] [PubMed]
Wang XY et al…
[Toxicity evaluation of purified terephthalic acid wastewater by using model Caenorhabditis elegans]
2007. Ying Yong Sheng Tai Xue Bao 18:1669-1672.
[WormBase] [PubMed]
Ghedin E et al…
Draft genome of the filarial nematode parasite Brugia malayi
2007. Science 317:1756-1760.
[WormBase] [PubMed]
Takeda K et al…
Apoptosis Signal-Regulating Kinase 1 in Stress and Immune Response
2007. Annu Rev Pharmacol Toxicol .
[WormBase] [PubMed]
Gracheva EO et al…
Tomosyn negatively regulates CAPS-dependent peptide release at Caenorhabditis elegans synapses
2007. J Neurosci 27:10176-10184.
[WormBase] [PubMed]
Schertel C and Conradt B.
C. elegans orthologs of components of the RB tumor suppressor complex have distinct pro-apoptotic functions
2007. Development .
[WormBase] [PubMed]
Harmon SM and Wyatt DE.
Evaluation of post-Katrina flooded soils for contaminants and toxicity to the soil invertebrates Eisenia fetida and Caenorhabditis elegans
2007. Chemosphere .
[WormBase] [PubMed]
Kubiak TM et al…
FMRFamide-like peptides (FLPs) encoded on the flp-18 precursor gene activate two isoforms of the orphan Caenorhabditis elegans G-protein-coupled receptor Y58G8A.4 heterologously expressed in mammalian cells
2007. Biopolymers .
[WormBase] [PubMed]
Luke-Glaser S et al…
The AAA-ATPase FIGL-1 controls mitotic progression, and its levels are regulated by the CUL-3MEL-26 E3 ligase in the C. elegans germ line
2007. J Cell Sci 120:3179-3187.
[WormBase] [PubMed]
Norman KR and Maricq AV.
Innexin function: minding the gap junction
2007. Curr Biol 17:R812-4.
[WormBase] [PubMed]
Schulenburg H and Ewbank JJ.
The genetics of pathogen avoidance in Caenorhabditis elegans
2007. Mol Microbiol .
[WormBase] [PubMed]
Bass TM et al…
Effects of resveratrol on lifespan in Drosophila melanogaster and Caenorhabditis elegans
2007. Mech Ageing Dev .
[WormBase] [PubMed]
Chalasani SH et al…
Global ‘worming’
2007. Genome Biol 8:314.
[WormBase] [PubMed]
Laurencon AC et al…
Identification of novel Regulatory Factor X (RFX) target genes by comparative genomics in Drosophila species
2007. Genome Biol 8:R195.
[WormBase] [PubMed]
Wong D et al…
Genome-wide investigation reveals pathogen-specific and shared signatures in the response of C. elegans to infection
2007. Genome Biol 8:R194.
[WormBase] [PubMed]
Fronius M and Clauss WG.
Mechano-sensitivity of ENaC: may the (shear) force be with you
2007. Pflugers Arch .
[WormBase] [PubMed]
Newfeld SJ et al…
Molecular evolution of a developmental pathway: phylogenetic analyses of transforming growth factor-beta family ligands, receptors and Smad signal transducers
1999. Genetics 152:783-795.
[WormBase] [PubMed]
Bernstein KA et al…
The small-subunit processome is a ribosome assembly intermediate
2004. Eukaryot Cell 3:1619-1626.
[WormBase] [PubMed]
J. Sambrook and D.W. Russell.
Molecular cloning: a laboratory manual
2001. .
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