I have a bit of a beginners bioinformatics question.
I want to examine some sequence reads in Wormbase GBrowse. I have them as a fastq file, and converted them to a BAM file, by running it through RNA STAR on the Galaxy platform.
There is a help page on wormbase (https://wormbase.org/gbrowse-static/annotation_help.html) that mentions BAM files can be uploaded as custom tracks, but when I try to do so I keep getting errors.
Any suggestions on what I might be doing wrong? I think either my BAM file is not what it should be, or there might be some step I am missing because I am unaware of it.